simulate_expression

Overview

simulate_expression is a program within the sortseq_tools package which simulates an MPRA experiment.

After you install `sortseq_tools`_, this program will be available to run at the command line.

Command-line usage

usage: sortseq simulate_expression [-h] [-lC TOTALLIBCOUNTS]
                                   [-mC TOTALMRNACOUNTS] [-i I] [-o OUT]
Options:
-lC=1000000, --totallibcounts=1000000
  Number of Sequencing Counts from your initial library
-mC=1000000, --totalmRNAcounts=1000000
 Number of mRNA sequences.
-i, --i Input file, otherwise input through the standard input.
-o, --out Undocumented

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